Method - recount3 and snapcount R/Bioconductor packages for investigation of 750,000 publicly available RNAseq samples from mouse and human.
Scientific field
Natural science -
Biology -
Genetics -
RNA Sequencing
Description
The recount3 resource provides access to data from over 750,000 RNAseq samples that were processed in a uniform manner using the Monorail pipeline. Links to the manuscript and pipeline can be found in the links section. Citation: Wilks, C., Zheng, S.C., Chen, F.Y. et al. recount3: summaries and queries for large-scale RNA-seq expression and splicing. Genome Biol 22, 323 (2021). https://doi.org/10.1186/s13059-021-02533-6
This method was created on 18 Oct 22
by team TransBio